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"WU Freezes BOINC Manager" Redux...
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Send message Joined: 28 Sep 11 Posts: 60 Credit: 22,764,173 RAC: 0 ![]() ![]() |
Dear MWAH Staff, I'm looking for your help here. MWAH WUs are continually causing BOINC Manager to hang at the system level. I addressed this issue here... WU Freezes BOINC Manager...: http://milkyway.cs.rpi.edu/milkyway/forum_thread.php?id=2639 ...back in October...resurrected the thread back in January...and, to date, have received zero feedback from anyone at MWAH. The problem persists and is now occurring with a less-than-48-hour regularity. Symptomology Desktop Clues... Due to the frequency of this problem I have had to resort to running Activity Monitor in OSX continuously with the floating CPU meter on my desktop to let me know when there is a problem with MWAH/BOINC. When everything is running normally this meter shows 8 green bars at 100% full levels indicating that all 8 CPUs are running at maximum performance. When the MWAH/BOINC freeze occurs the floating CPU meters show only 4 green bars at approximately 45% levels. I know it's time to attend to MWAH/BOINC at that point. Sometimes hours go by before I'm at the computer to discover that the software has hung. MWAH/BOINC Clues... The Task tab in BOINC Manager shows 1 MWAH WU Completed Ready to report at 100% and 7 or 8 running MWAH WUs but the Progress/Elapsed/Remaining columns show no changes in percentages or time for those supposedly running 7 or 8 WUs. The software has now hung. System Clues... Activity Monitor sometimes shows that the supposed Running WUs are still in system memory (using 0.0% CPU) and sometimes the WUs have been dumped from system memory. BOINC (user "me") is still in memory but using 0.0% CPU. boinc (user "boinc_master") is still running using ~87% of the total CPUs. Of note is that two system processes are working their tails off at this point also...syslog @ ~47% and mDNSResponder @ ~ 37%. Total CPU load: 87 + 47 + 37 = 171% total CPU = 4 green bars at ~ 45%. More MWAH/BOINC Clues... Trying to do anything in MWAH/BOINC at this point results in the appearance of the dreaded Communicating with BOINC Client. Please wait... dialog box. MWAH/BOINC will never recover or clear itself from this state. The only option at this point is to click the Quit BOINC Manager button in that dialog box and start over. Note: One can avoid the appearance of that dialog box by just going to "Quit BOINC Manger" in the File menu. New System Clues... Since my original post I decided to see if I could discover a bit more as to what was happening to my system when this software hang occurred...here's a breakdown of events from the latest occurrence... 1. I notice the 4 x 45% green CPU bars at 22:50...yep, another 4-CPU MWAH/BOINC software hang. Last BOINC log entry at 21:26...not bad, only lost about an hour and a half of crunching this time. I quit/restart BOINC Manager. 2. stdoutdae log of this... 23-Feb-2012 21:26:12 [Milkyway@Home] [task] result ps_separation_82_2s_mix2_3_6073084_0 checkpointed 23-Feb-2012 21:26:12 [Milkyway@Home] [task] result ps_separation_82_2s_mix2_3_6073029_0 checkpointed 23-Feb-2012 21:26:12 [Milkyway@Home] [task] result ps_separation_82_2s_mix3_3_6076873_0 checkpointed 23-Feb-2012 21:26:12 [Milkyway@Home] [task] result ps_separation_82_2s_mix0_3_6077609_0 checkpointed 23-Feb-2012 21:26:12 [Milkyway@Home] [task] result ps_separation_82_2s_mix1_3_6075129_0 checkpointed 23-Feb-2012 21:26:12 [Milkyway@Home] [task] result ps_separation_82_2s_mix3_3_6079305_0 checkpointed 23-Feb-2012 21:26:12 [Milkyway@Home] [task] result ps_separation_82_2s_mix2_3_6079646_0 checkpointed 23-Feb-2012 21:26:12 [Milkyway@Home] [task] result ps_separation_82_2s_mix3_3_6086074_0 checkpointed 23-Feb-2012 21:26:29 [Milkyway@Home] [task] Process for ps_separation_82_2s_mix2_3_6073084_0 exited 23-Feb-2012 21:26:29 [Milkyway@Home] [task] task_state=EXITED for ps_separation_82_2s_mix2_3_6073084_0 from handle_exited_app 23-Feb-2012 21:26:29 [Milkyway@Home] [task] process exited with status 0 23-Feb-2012 21:26:29 [Milkyway@Home] Computation for task ps_separation_82_2s_mix2_3_6073084_0 finished 23-Feb-2012 21:26:29 [Milkyway@Home] [task] result state=FILES_UPLOADING for ps_separation_82_2s_mix2_3_6073084_0 from CS::app_finished 23-Feb-2012 21:26:29 [Milkyway@Home] [task] result state=FILES_UPLOADED for ps_separation_82_2s_mix2_3_6073084_0 from CS::update_results 23-Feb-2012 21:26:29 [Milkyway@Home] [task] ACTIVE_TASK::start(): forked process: pid 12521 23-Feb-2012 21:26:29 [Milkyway@Home] [task] task_state=EXECUTING for ps_separation_82_2s_mix2_3_6086089_0 from start 23-Feb-2012 21:26:29 [Milkyway@Home] Starting task ps_separation_82_2s_mix2_3_6086089_0 using milkyway version 101 23-Feb-2012 22:50:05 [---] Starting BOINC client version 6.12.35 for x86_64-apple-darwin 23-Feb-2012 22:50:05 [---] log flags: file_xfer, sched_ops, task, task_debug 23-Feb-2012 22:50:05 [---] Libraries: libcurl/7.19.7 OpenSSL/0.9.7l zlib/1.2.3 c-ares/1.6.0 23-Feb-2012 22:50:05 [---] Data directory: /Library/Application Support/BOINC Data 23-Feb-2012 22:50:05 [---] Processor: 8 GenuineIntel Intel(R) Core(TM) i7-2600 CPU @ 3.40GHz [x86 Family 6 Model 42 Stepping 7] 23-Feb-2012 22:50:05 [---] Processor features: FPU VME DE PSE TSC MSR PAE MCE CX8 APIC SEP MTRR PGE MCA CMOV PAT PSE36 CLFSH DS ACPI MMX FXSR SSE SSE2 SS HTT TM PBE SSE3 PCLMULQDQ DTES64 MON DSCPL VMX SMX EST TM2 SSSE3 CX16 TPR PDCM SSE4.1 SSE4.2 xAPIC POPCNT AES XSAVE OSXSAVE PCID TSCTMR AVX1.0 23-Feb-2012 22:50:05 [---] OS: Mac OS X 10.6.8 (Darwin 10.8.0) 23-Feb-2012 22:50:05 [---] Memory: 16.00 GB physical, 359.23 GB virtual 23-Feb-2012 22:50:05 [---] Disk: 465.75 GB total, 358.99 GB free 23-Feb-2012 22:50:05 [---] Local time is UTC -5 hours 23-Feb-2012 22:50:05 [---] No usable GPUs found 23-Feb-2012 22:50:05 [climateprediction.net] URL http://climateprediction.net/; Computer ID 1171126; resource share 100 23-Feb-2012 22:50:05 [Milkyway@Home] URL http://milkyway.cs.rpi.edu/milkyway/; Computer ID 330727; resource share 100 23-Feb-2012 22:50:05 [SETI@home] URL http://setiathome.berkeley.edu/; Computer ID 6180003; resource share 100 23-Feb-2012 22:50:05 [Milkyway@Home] General prefs: from Milkyway@Home (last modified 22-Feb-2012 15:54:46) 23-Feb-2012 22:50:05 [Milkyway@Home] Computer location: home 23-Feb-2012 22:50:05 [Milkyway@Home] General prefs: no separate prefs for home; using your defaults 23-Feb-2012 22:50:05 [---] Reading preferences override file 23-Feb-2012 22:50:05 [---] Preferences: 23-Feb-2012 22:50:05 [---] max memory usage when active: 12288.00MB 23-Feb-2012 22:50:05 [---] max memory usage when idle: 14745.60MB 23-Feb-2012 22:50:05 [---] max disk usage: 100.00GB 23-Feb-2012 22:50:05 [---] (to change preferences, visit the web site of an attached project, or select Preferences in the Manager) 23-Feb-2012 22:50:05 [---] Not using a proxy Initialization completed 23-Feb-2012 22:50:05 [Milkyway@Home] [task] ACTIVE_TASK::start(): forked process: pid 152 23-Feb-2012 22:50:05 [Milkyway@Home] [task] task_state=EXECUTING for ps_separation_82_2s_mix2_3_6073029_0 from start 23-Feb-2012 22:50:05 [Milkyway@Home] Restarting task ps_separation_82_2s_mix2_3_6073029_0 using milkyway version 101 23-Feb-2012 22:50:05 [Milkyway@Home] [task] ACTIVE_TASK::start(): forked process: pid 153 23-Feb-2012 22:50:05 [Milkyway@Home] [task] task_state=EXECUTING for ps_separation_82_2s_mix3_3_6076873_0 from start 23-Feb-2012 22:50:05 [Milkyway@Home] Restarting task ps_separation_82_2s_mix3_3_6076873_0 using milkyway version 101 23-Feb-2012 22:50:05 [Milkyway@Home] [task] ACTIVE_TASK::start(): forked process: pid 154 23-Feb-2012 22:50:05 [Milkyway@Home] [task] task_state=EXECUTING for ps_separation_82_2s_mix0_3_6077609_0 from start 23-Feb-2012 22:50:05 [Milkyway@Home] Restarting task ps_separation_82_2s_mix0_3_6077609_0 using milkyway version 101 23-Feb-2012 22:50:05 [Milkyway@Home] [task] ACTIVE_TASK::start(): forked process: pid 155 23-Feb-2012 22:50:05 [Milkyway@Home] [task] task_state=EXECUTING for ps_separation_82_2s_mix1_3_6075129_0 from start 23-Feb-2012 22:50:05 [Milkyway@Home] Restarting task ps_separation_82_2s_mix1_3_6075129_0 using milkyway version 101 23-Feb-2012 22:50:05 [Milkyway@Home] [task] ACTIVE_TASK::start(): forked process: pid 156 23-Feb-2012 22:50:05 [Milkyway@Home] [task] task_state=EXECUTING for ps_separation_82_2s_mix3_3_6079305_0 from start 23-Feb-2012 22:50:05 [Milkyway@Home] Restarting task ps_separation_82_2s_mix3_3_6079305_0 using milkyway version 101 23-Feb-2012 22:50:05 [Milkyway@Home] [task] ACTIVE_TASK::start(): forked process: pid 157 23-Feb-2012 22:50:05 [Milkyway@Home] [task] task_state=EXECUTING for ps_separation_82_2s_mix2_3_6079646_0 from start 23-Feb-2012 22:50:05 [Milkyway@Home] Restarting task ps_separation_82_2s_mix2_3_6079646_0 using milkyway version 101 23-Feb-2012 22:50:05 [Milkyway@Home] [task] ACTIVE_TASK::start(): forked process: pid 158 23-Feb-2012 22:50:05 [Milkyway@Home] [task] task_state=EXECUTING for ps_separation_82_2s_mix3_3_6086074_0 from start 23-Feb-2012 22:50:05 [Milkyway@Home] Restarting task ps_separation_82_2s_mix3_3_6086074_0 using milkyway version 101 23-Feb-2012 22:50:05 [Milkyway@Home] [task] ACTIVE_TASK::start(): forked process: pid 159 23-Feb-2012 22:50:05 [Milkyway@Home] [task] task_state=EXECUTING for ps_separation_82_2s_mix2_3_6086089_0 from start 23-Feb-2012 22:50:05 [Milkyway@Home] Restarting task ps_separation_82_2s_mix2_3_6086089_0 using milkyway version 101 23-Feb-2012 22:50:05 [Milkyway@Home] Sending scheduler request: To fetch work. 23-Feb-2012 22:50:05 [Milkyway@Home] Reporting 1 completed tasks, requesting new tasks for CPU As per usual, no clues here. 3. I discovered a few weeks back that at the system level BOINC Manager is stuck in an endless loop. Here's a snippet of my OSX syslog from this time period today beginning at the MWAH/BOINC hang at 21:26... Feb 23 21:26:30 imac /Applications/BOINCManager.app/Contents/Resources/boinc[151]: dnssd_clientstub deliver_request: socketpair failed 24 (Too many open files) Feb 23 21:26:30: --- last message repeated 499 times --- Feb 23 21:26:30 imac /Applications/BOINCManager.app/Contents/Resources/boinc[151]: *** process 151 exceeded 500 log message per second limit - remaining messages this second discarded *** Feb 23 21:26:30 imac /Applications/BOINCManager.app/Contents/Resources/boinc[151]: dnssd_clientstub deliver_request: socketpair failed 24 (Too many open files) Feb 23 21:26:31: --- last message repeated 499 times --- Feb 23 21:26:31 imac /Applications/BOINCManager.app/Contents/Resources/boinc[151]: *** process 151 exceeded 500 log message per second limit - remaining messages this second discarded *** Feb 23 21:26:31 imac /Applications/BOINCManager.app/Contents/Resources/boinc[151]: dnssd_clientstub deliver_request: socketpair failed 24 (Too many open files) ...and this continues unabated for the full time until I intervene by quitting BOINC manager at 22:50 and do a system restart... Feb 23 22:48:48 imac /Applications/BOINCManager.app/Contents/Resources/boinc[151]: *** process 151 exceeded 500 log message per second limit - remaining messages this second discarded *** Feb 23 22:48:49 imac /Applications/BOINCManager.app/Contents/Resources/boinc[151]: dnssd_clientstub deliver_request: socketpair failed 24 (Too many open files) Feb 23 22:48:49: --- last message repeated 499 times --- Feb 23 22:48:49 imac /Applications/BOINCManager.app/Contents/Resources/boinc[151]: *** process 151 exceeded 500 log message per second limit - remaining messages this second discarded *** Feb 23 22:48:49 imac /Applications/BOINCManager.app/Contents/Resources/boinc[151]: dnssd_clientstub deliver_request: socketpair failed 24 (Too many open files) Feb 23 22:48:50: --- last message repeated 499 times --- Feb 23 22:48:50 imac /Applications/BOINCManager.app/Contents/Resources/boinc[151]: *** process 151 exceeded 500 log message per second limit - remaining messages this second discarded *** Feb 23 22:49:08 iMac configd[13]: setting hostname to "iMac.local" Feb 23 22:49:08 iMac configd[13]: network configuration changed. Feb 23 22:49:11 iMac [0x0-0x32032].org.xxx[6041]: NOTE: child process received `Goodbye', closing down Feb 23 22:49:11: --- last message repeated 2 times --- Feb 23 22:49:11 iMac com.apple.launchd.peruser.501[103] ([0x0-0x9009].com.xxx[131]): Exited: Killed Feb 23 22:49:11 iMac com.apple.launchd.peruser.501[103] ([0x0-0xf00f].com.apple.ActivityMonitor[176]): Exited: Killed Feb 23 22:49:11 iMac loginwindow[30]: DEAD_PROCESS: 30 console Feb 23 22:49:12 iMac shutdown[12578]: reboot by Owner: ...this accounts for why syslog was using 47% CPU and mDNSResponder was using 37%! Final Note: The system and MWAH/BOINC will now run fine for the next day or so (not more than two!) until this occurs again... Any help, ideas, suggestions would be greatly appreciated?! Best to you, :) |
Send message Joined: 8 May 10 Posts: 576 Credit: 15,979,383 RAC: 0 ![]() ![]() |
BOINC freezing isn't really something milkyway can do. Can you try using the sample process thing in Activity Monitor on the boinc processes when it does happen (it's there on Lion)? |
Send message Joined: 28 Sep 11 Posts: 60 Credit: 22,764,173 RAC: 0 ![]() ![]() |
BOINC freezing isn't really something milkyway can do. Can you try using the sample process thing in Activity Monitor on the boinc processes when it does happen (it's there on Lion)? Can do, Matt. Thanks for the suggestion. I posted this problem here as the folks over at BOINC informed me that they were no longer servicing any per-version 7 releases of BOINC Manager...my hope was that someone here might have some "legacy" fluency with this particular misbehavior. If the problem was a bit more infrequent I'd probably not care too much, but having to reset things 2-3-4 times a week was starting to get to me. Thanks again! :) |
![]() Send message Joined: 30 Dec 07 Posts: 311 Credit: 149,490,184 RAC: 0 ![]() ![]() |
One possibility is the scheduling/handover interaction between mt tasks and single threaded tasks. I remember when I did AQUA mt tasks I sometimes had the problem of idle cores, so the combination of mt tasks and single threaded tasks has a history of causing trouble in BOINC. You may have the opposite problem of an nbody mt task starting or attempting to start causing some separation tasks to freeze and boinc.exe becoming unresponsive. I would not process separation tasks on a CPU myself because I feel CPU resources are more efficiently used to do nbody tasks or other CPU projects. I don't see the point in taking 2 hours on a CPU core for a task that can be done in under a minute on the last three generations of ATI/AMD cards. If the nbody tasks are currently too short and cause work fetch issues I would share CPU resources with another project. Or just give the MilkyWay project a miss if I had no GPU until the nbody tasks are a more reasonable length and/or the number of tasks allowed in the cache is increased so that selecting nbody tasks only no longer causes work fetch problems. 5 seconds runtime is just too short with the current number of tasks allowed. Also the shorter that mt tasks are the greater the number of times that BOINC is switching from and to single threaded tasks when the mt tasks start or finish. So the greater potential for trouble to occur and for it to happen more often. If the CPU is busy at the time of the switch and it is delayed/interrupted then this could possibly cause the problem, especially as you are using all 8 cores for BOINC. The first thing you could try is configuring BOINC to use 7 cores. This leaves a core free for operating system processes and so minimises/avoids momentary CPU overcommitment. Some do not like this idea because it reduces BOINC contribution slightly, but due to contention issues the reduction is less than the 12.5% expected because the tasks speed up slightly. In the case of high cache/memory intense CPU tasks the reduction in total work performed is so low that it is of no concern. If that didn't work you could then perhaps try limiting the number of CPU cores used by nbody tasks to 5 with an app_info.xml file. With the current short tasks you could possibly even limit nbody to 4, 3 or 2 cores but this would allow more than 1 nbody task to run at the same time. You would need to include both the nbody and the separation application in the app_info.xml if you wanted to do both. The theory here is that a smaller number of CPU cores being switched by BOINC when mt tasks start or finish has less potential to cause trouble. May not work of course, just something to experiment with if you wish. A further option is to try a future development version of BOINC which has had some changes made in mt tasks job scheduling. This is designed to fix the idle CPUs problem but the changes may also affect your issues. These changes were only made 3 days ago so you will have have to wait until a development BOINC version with the changes included is released. Changeset 25312 in boinc You should only try a development version of BOINC after you have exhausted all other options. Only use as a last resort. The usual disclaimers apply about development versions of BOINC. May be unstable, may cause loss of all work, etc., etc. One particular thing to note is that you can't revert to a current release version of BOINC from development 7.0.xx versions without losing all work in progress. This is of particular importance to those who contribute to projects with very long running tasks such as Climate Prediction. |
Send message Joined: 28 Sep 11 Posts: 60 Credit: 22,764,173 RAC: 0 ![]() ![]() |
... I would not process separation tasks on a CPU myself because I feel CPU resources are more efficiently used to do nbody tasks or other CPU projects. I don't see the point in taking 2 hours on a CPU core for a task that can be done in under a minute on the last three generations of ATI/AMD cards. ... Hi Kashi, Thanks for taking the time to put all of that together, I do appreciate it... :) Allocating GPU cycles for MWAH/BOINC projects is a near-impossibility for those of us crunching away in Apple's "Walled Garden of Hardware", with the exception of their MacPro line (which can run DP GPUs for MWAH), and Hackintoshes, all of their computers are based off of mobile platforms with SP GPUs. To update my original observed symptomology, it is not just N-Body's that seem to trigger these hangs. As for your suggestions of rolling back CPU allocations from 100%, I had considered this initially but the issue I'm describing here seems to be a network communications one and so I'm thinking that CPU usage levels are not relevant here. The never-ending log entries... Feb 23 21:26:30 imac /Applications/BOINCManager.app/Contents/Resources/boinc[151]: dnssd_clientstub deliver_request: socketpair failed 24 (Too many open files) ...look to me to be a exitless-loop of DNS socketpair attempts by MWAH/BOINC Manager. My (very) crude understanding of how dnssd_clientstub.c works at the system level indicates to me that there is a network communications issue occurring in the MWAH/BOINC chain-of-events. Not being a coder I do not know how to fully interpret these things, but the dnssd_clientstub deliver_request: socketpair failed 24 (Too many open files) reports are clearly being generated from there... dnssd_clientstub.c: http://opensource.apple.com/source/mDNSResponder/mDNSResponder-212.1/mDNSShared/dnssd_clientstub.c ...(Warning: 10.5 Leopard version...I couldn't locate the 10.6 Snow Leopard or 10.7 Lion resources!). There was a reference in there about mDNSResponder and the Bonjour API being broken for 64-bit apps. (Important?) (A quick google search for dnssd_clientstub deliver_request socketpair failed 24 reveals that a lot of other software developer folks are encountering this same problem.) My pitiful understanding of how BOINC projects and BOINC Manager communicate with the mothership to both report and receive new WUs has led me here to the boards in search of answers. :D I've run SETI and CPDN for days-long stretches at 100% and have never seen either of those two projects cause this problem...it seems isolated to MWAH/BOINC. Hope this was helpful! :) |
![]() Send message Joined: 30 Dec 07 Posts: 311 Credit: 149,490,184 RAC: 0 ![]() ![]() |
Fair enough, I wasn't aware that MilkyWay GPU was not available for many Apple computers. You had mentioned nbody tasks in your previous thread so I thought they may be involved somehow. So if it still occurs even when the nbody application is not selected and only separation tasks are processed, it cannot be due to one application or the other but to MilkyWay itself. So what is different about MilkyWay compared to other projects, possibly in the network area? I haven't done any nbody tasks so I don't know if they are the same but I know that separation tasks no longer send an upload file but include the results when they are reported. Perhaps Mac BOINC version is waiting for uploads or acknowledgements that never happen? This may not be relevant but it's the only difference to other projects I can think of. I can't offer any Apple specific help at all, I have never used an Apple computer and know almost nothing about them. |
Send message Joined: 28 Sep 11 Posts: 60 Credit: 22,764,173 RAC: 0 ![]() ![]() |
Hi Kashi, Yeah, while Apple does do a grand job making sure everything inside their boxes work to a tee they've always been restrictive on hardware choices and upgrade paths...sigh... My fault for not being a bit more observant when this problem first surfaced re: NBody's being the only culprit...oops! I thought the whole MWAH/BOINC connection odd, too...ergo these posts. In the meantime I continue to hold out hope that someone with some previous experience and/or understanding with this error can help shine some light on things! I've been using Apple products for nearly 20 years now and I can only pretend to know anything about them! :) I do appreciate your help and insights here! Best, :) |
Send message Joined: 28 Sep 11 Posts: 60 Credit: 22,764,173 RAC: 0 ![]() ![]() |
Hi Matt, There are 5 ways to examine the Sample Process data in Activity Monitor... 1. Sample Text, 2. # of Samples, 3. # of Seconds, 4. % of Parent and 5. % of Thread. Below is the Sample Text view of boinc (User: boinc_master) which is running at 87% CPU from my latest 4-CPU hang... I can zip up and send you any/all of the following saved Sample Process views... boic 1–5 (boinc_master) BOINC 1–5 (Me) mDNSResponder 1–5 syslog 1–5 ...just PM me with an email address. If there are any other things you'd like me to check, report on, etc. kindly let me know! ______________ Note: MWAH/Boinc is currently hung...all Progress, Elapsed, Remaining activity is frozen in the current states... Current Status of MWAH/BOINC Manager 100.000% Ready to report 82_2s_mix1_3_6662031_1 79.766% Waiting to run 82_2s_mix2_3_6666333_0 23.147% Waiting to run 82_2s_mix4_3_6667392_0 21.191% Waiting to run 82_2s_mix3_3_6667847_0 20.698% Waiting to run 82_2s_mix1_3_6665662_0 17.514% Waiting to run 82_2s_mix2_3_6667202_0 13.145% Waiting to run 82_2s_mix4_3_6668219_0 11.250% Waiting to run 82_2s_mix0_3_6669847_0 100.000% Ready to report nbody-Plum_Embedded_13182472_0 100.000% Running nbody-Plum_Embedded_13183500_0 _______ Last Boinc log entry at Mon Feb 27 16:50 (currently 19:26) _______ Hope this helps! :) _______ Analysis of sampling boinc (pid 16118) every 1 millisecond Process: boinc [16118] Path: /Applications/BOINCManager.app/Contents/Resources/boinc Load Address: 0x1000 Identifier: boinc Version: ??? (???) Code Type: X86 (Native) Parent Process: BOINCManager [16113] Date/Time: 2012-02-27 17:36:43.773 -0500 OS Version: Mac OS X 10.6.8 (10K549) Report Version: 7 Call graph: 2629 Thread_133420 DispatchQueue_1: com.apple.main-thread (serial) 2629 0x10df9 2629 0x10ed2 2629 0x3ba9e 2629 0x5d5a4 2629 0x3005d 2629 0x609d7 2629 0x2f613 2629 0x39a5f 2629 0x3934e 2629 0x489a1 2629 getaddrinfo 2629 si_addrinfo 2629 search_addrinfo 2629 _mdns_addrinfo 2629 _mdns_search 2629 _mdns_query_mDNSResponder 1390 _mdns_query_start 1385 DNSServiceQueryRecord 1256 deliver_request 1114 syslog 1109 vsyslog 213 vm_allocate 209 mach_msg 205 mach_msg_trap 4 mach_msg 3 mig_get_reply_port 1 vm_allocate 199 asl_format_message 191 _asl_append_string 94 reallocf 87 realloc 45 malloc_zone_realloc 43 szone_realloc 10 szone_free 9 szone_free 1 tiny_free_list_add_ptr 10 szone_malloc_should_clear 7 tiny_malloc_from_free_list 5 tiny_malloc_from_free_list 2 tiny_free_list_add_ptr 3 szone_malloc_should_clear 7 szone_realloc 5 szone_size 4 __memcpy 4 __spin_lock 2 tiny_free_list_remove_ptr 1 tiny_free_list_add_ptr 2 malloc_zone_realloc 29 szone_size 13 realloc 7 reallocf 89 _asl_append_string 5 strlen 2 __memcpy 1 malloc 1 malloc_zone_malloc 1 szone_malloc_should_clear 1 __cpu_number 8 asl_format_message 166 _asl_server_message 165 mach_msg 163 mach_msg_trap 2 mach_msg 1 _asl_server_message 84 asl_set 63 asl_set_query 25 strdup 14 malloc 12 malloc_zone_malloc 9 szone_malloc_should_clear 8 tiny_malloc_from_free_list 1 szone_malloc_should_clear 1 DYLD-STUB$$_spin_unlock 1 malloc_zone_malloc 1 szone_malloc 2 malloc 5 __memcpy 5 strdup 1 strlen 14 reallocf 10 realloc 9 malloc_zone_realloc 9 szone_realloc 4 szone_free 2 szone_free 2 tiny_free_list_add_ptr 2 __spin_lock 1 szone_malloc_should_clear 1 __cpu_number 1 szone_realloc 1 szone_size 1 realloc 4 reallocf 12 asl_set_query 6 asprintf 4 __vfprintf 2 malloc 2 malloc_zone_malloc 2 szone_malloc_should_clear 1 szone_malloc_should_clear 1 tiny_malloc_from_free_list 5 atoi 4 strtol_l 1 atoi 1 DYLD-STUB$$strtol_l 20 strcmp 1 DYLD-STUB$$strcmp 83 gethostname 79 __sysctl 4 sysctl 77 __bzero 61 asprintf 42 __vfprintf 26 __vfprintf 6 __ultoa 6 localeconv_l 4 __sfvwrite 3 __sfvwrite 1 __memcpy 9 asprintf 6 malloc 5 malloc_zone_malloc 4 szone_malloc_should_clear 3 szone_malloc_should_clear 1 __cpu_number 1 __spin_lock 1 malloc 2 __bzero 1 DYLD-STUB$$localeconv_l 1 pthread_getspecific 53 asl_free 53 free 26 szone_free_definite_size 17 szone_free_definite_size 8 tiny_free_list_add_ptr 1 tiny_free_list_remove_ptr 11 szone_size 10 __spin_lock 4 free 2 OSSpinLockUnlock 37 snprintf 30 __vfprintf 16 __vfprintf 9 __sfvwrite 4 __memcpy 4 __sfvwrite 1 memcpy 3 localeconv_l 1 __ultoa 1 strlen 6 snprintf 1 __bzero 33 vasprintf 27 __vfprintf 20 __vfprintf 5 __sfvwrite 4 __sfvwrite 1 __memcpy 1 __ultoa 1 strlen 3 malloc 2 malloc 1 malloc_zone_malloc 3 vasprintf 31 free 10 szone_size 8 __spin_lock 8 szone_free_definite_size 7 szone_free_definite_size 1 tiny_free_list_add_ptr 5 free 15 asl_new 10 strdup 6 malloc 5 malloc_zone_malloc 4 szone_malloc_should_clear 2 szone_malloc_should_clear 2 tiny_malloc_from_free_list 1 malloc_zone_malloc 1 malloc 2 strlen 1 __memcpy 1 strdup 5 calloc 3 malloc_zone_calloc 3 szone_malloc_should_clear 1 __bzero 1 szone_malloc_should_clear 1 tiny_malloc_from_free_list 2 calloc 14 getuid 12 vsyslog 9 getgid 9 notify_check 6 token_table_find 3 pthread_mutex_lock 2 pthread_mutex_lock 1 OSSpinLockUnlock 2 _nc_table_find_n 1 pthread_mutex_unlock 3 notify_check 7 gettimeofday 7 __gettimeofday 5 __nanotime 2 __gettimeofday 3 strcmp 2 strncpy 1 __bzero 1 strncpy 1 asl_syslog_faciliy_num_to_name 3 syslog 2 DYLD-STUB$$asl_format_message 130 socketpair$UNIX2003 4 deliver_request 4 strerror$UNIX2003 3 free 2 szone_free_definite_size 1 free 1 __error 107 DNSServiceRefDeallocate 92 write_all 90 send$NOCANCEL$UNIX2003 90 sendto$NOCANCEL$UNIX2003 1 _sysenter_trap 1 write_all 9 create_hdr 7 malloc 7 malloc_zone_malloc 6 szone_malloc_should_clear 6 tiny_malloc_from_free_list 1 __spin_lock 1 __bzero 1 create_hdr 2 DNSServiceRefDeallocate 2 FreeDNSServiceOp 2 free 1 free 1 szone_size 2 free 1 free 1 szone_free_definite_size 14 create_hdr 4 malloc 4 malloc_zone_malloc 3 szone_malloc_should_clear 3 tiny_malloc_from_free_list 1 malloc_zone_malloc 3 create_hdr 3 put_string 1 DYLD-STUB$$strcpy 1 DYLD-STUB$$strlen 1 __bzero 1 strcpy 3 DNSServiceQueryRecord 1 ConnectToServer 1 malloc 1 malloc_zone_malloc 1 cerror 1 cthread_set_errno_self 1 __error 1 put_uint16 1 put_uint32 1 strcpy 4 strlen 1 _mdns_query_start 1136 DNSServiceCreateConnection 598 ConnectToServer 373 connect$NOCANCEL$UNIX2003 153 socket 66 setsockopt 6 ConnectToServer 529 deliver_request 485 read_all 484 recv$NOCANCEL$UNIX2003 484 recvfrom$NOCANCEL$UNIX2003 1 read_all 30 write_all 29 send$NOCANCEL$UNIX2003 29 sendto$NOCANCEL$UNIX2003 1 write_all 10 free 5 szone_size 3 free 2 szone_free_definite_size 1 OSSpinLockLock 1 szone_free_definite_size 3 deliver_request 1 ConvertHeaderBytes 4 create_hdr 4 malloc 3 malloc_zone_malloc 3 szone_malloc_should_clear 1 OSSpinLockLock 1 OSSpinLockUnlock 1 __cpu_number 1 malloc 2 DNSServiceCreateConnection 2 _sysenter_trap 1 DYLD-STUB$$setsockopt 97 DNSServiceRefDeallocate 95 close 1 DNSServiceRefDeallocate 1 FreeDNSServiceOp 1 free 3 _mdns_query_mDNSResponder 1 DYLD-STUB$$strlen 1 _mdns_query_clear 1 pthread_mutex_lock 1 OSSpinLockLock 2629 Thread_133422 DispatchQueue_2: com.apple.libdispatch-manager (serial) 2629 start_wqthread 2629 _pthread_wqthread 2629 _dispatch_worker_thread2 2629 _dispatch_queue_invoke 2629 _dispatch_mgr_invoke 2629 kevent Total number in stack (recursive counted multiple, when >=5): 11 szone_malloc_should_clear 10 malloc 10 malloc_zone_malloc 7 __bzero 7 __memcpy 7 free 7 szone_size 7 tiny_malloc_from_free_list 6 __spin_lock 6 strlen 6 tiny_free_list_add_ptr 5 szone_free_definite_size Sort by top of stack, same collapsed (when >= 5): kevent 2629 recvfrom$NOCANCEL$UNIX2003 484 connect$NOCANCEL$UNIX2003 373 mach_msg_trap 368 socket 153 socketpair$UNIX2003 130 sendto$NOCANCEL$UNIX2003 119 close 95 _asl_append_string 89 __bzero 84 __sysctl 79 __vfprintf 66 setsockopt 66 szone_size 62 szone_free_definite_size 28 __spin_lock 26 tiny_malloc_from_free_list 26 strcmp 23 __memcpy 18 free 16 tiny_free_list_add_ptr 15 getuid 14 realloc 14 strlen 14 asl_set_query 12 vsyslog 12 __sfvwrite 11 reallocf 11 szone_free 11 szone_malloc_should_clear 11 asprintf 9 getgid 9 localeconv_l 9 __ultoa 8 asl_format_message 8 szone_realloc 8 deliver_request 7 malloc 7 ConnectToServer 6 mach_msg 6 snprintf 6 strdup 6 __nanotime 5 malloc_zone_malloc 5 Binary Images: 0x1000 - 0xcdff7 +boinc (??? - ???) <9993FA00-F29B-6854-E41C-3592E2AA86B2> /Applications/BOINCManager.app/Contents/Resources/boinc 0xe4000 - 0x199fe7 libcrypto.0.9.7.dylib (0.9.7 - compatibility 0.9.7) <78B6EEB6-50D9-4479-D1A5-B4C381A07E4D> /usr/lib/libcrypto.0.9.7.dylib 0x1df000 - 0x205fff 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By way of follow up, Matt...I discovered this while researching socketpair on the internets... #1141 (boinc client hangs) – BOINC: http://boinc.berkeley.edu/trac/ticket/1141 :) |
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Send message Joined: 28 Sep 11 Posts: 60 Credit: 22,764,173 RAC: 0 ![]() ![]() |
"fixed in 6.12.41" Hi Kashi, Thanks so much for ferreting this out! Looks like this fits my situation to a tee...Mac OSX 10.6.8 BOINC 6.12.35...Bingo! Ticket #1144 (closed Defect: fixed) This looks to be the solution for both this problem (4-CPU hang/dnssd_clientstub deliver_request: socketpair failed 24 (Too many open files) and for the crash/auto-reboot issues I was encountering here (Second Issue: unattended spontaneous BOINC Manager restart))... (Waiting on GPU) Returns!...Repeatable on demand!: http://boinc.berkeley.edu/dev/forum_thread.php?id=7212&nowrap=true#42278 ...and here (BOINC Manager Spontaneous Restart)... Long Post - BM Spontaneous Restart: http://boinc.berkeley.edu/dev/forum_thread.php?id=7237#42284 ...and both here (auto-reboot about a minute later and here (WU freeze while forcing 4 CPU's to run continuously)) from the same thread... N-Body's Trashing Task & Project Queues...: http://milkyway.cs.rpi.edu/milkyway/forum_thread.php?id=2718&nowrap=true#52142 N-Body's Trashing Task & Project Queues...: http://milkyway.cs.rpi.edu/milkyway/forum_thread.php?id=2718&nowrap=true#52146 ...and, of course, the original thread... WU Freezes BOINC Manager...: http://milkyway.cs.rpi.edu/milkyway/forum_thread.php?id=2639 ...super news! You're my superhero for the rest of the week! :) (Now I'll have to go find something else to fret about!) Some side notes: It was getting to the point of predictability with this issue, leave MWAH/BOINC running for extended periods and it will inevitably crash from a socketpair too many open files buildup. Also, I began to notice that just prior to the crash the BOINC Manager Event Log window (which I was leaving open all the time) would momentarily go blank whenever I would open up the OSX System Preferences panels in the Apple Menu (to change my Display Sleep settings from 1–15 minutes or back)...I knew the next MWAH WU in the queue would trigger the glitch...it was something like to an idiot light going off telling me that the MWAH/BOINC socketpair open files was full and wasn't gonna take it anymore! Matt A. should be grateful here, as well...I was going to offer to send him the contents of the... sched_request_milkyway.cs.rpi.edu_milkyway.xml stdoutdae.txt job_log_milkyway.cs.rpi.edu_milkyway.txt client_state.xml client_state_prev.xml statistics_milkyway.cs.rpi.edu_milkyway.xml daily_xfer_history.xml sched_reply_milkyway.cs.rpi.edu_milkyway.xml ...files which all show final "modified" status at the moment of the crash! (Phew!) Of course if he still wants them I have them put aside in a MWAH/BOINC forensics folder! And, finally, for the time being I'll just clear MWAH/BOINC with a daily restart to keep the issue at bay until I'm ready to devote some time to chasing BOINC v.7 glitches! Thanks so much Kashi and Matt for your interest in this issue! :) P.S. Added linkbacks to here at those other threads in case anyone else has been running into this problem! |
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....And, finally, for the time being I'll just clear MWAH/BOINC with a daily restart to keep the issue at bay until I'm ready to devote some time to chasing BOINC v.7 glitches!.... Not going to try 6.12.41 or 6.12.43 from my second link? Perhaps the best option if you don't mind restarting every day. Who knows if those versions have something else that could cause a problem. I would never have found the reference to the fix if you hadn't found the first ticket reference from scasady.. |
Send message Joined: 28 Sep 11 Posts: 60 Credit: 22,764,173 RAC: 0 ![]() ![]() |
....And, finally, for the time being I'll just clear MWAH/BOINC with a daily restart to keep the issue at bay until I'm ready to devote some time to chasing BOINC v.7 glitches!.... You'll forgive my ignorance here, but I thought 6.12.41/43 were actually just preproduction beta v.7's? As for finding the scasady ticket, well, coffee before bed time will do that for you, too. :) |
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I think 6.12.43 was the last of the older kind similar to the current release version. As far as I know the new 7.0.xx type with the new scheduling code started at 6.13.0. |
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I think 6.12.43 was the last of the older kind similar to the current release version. As far as I know the new 7.0.xx type with the new scheduling code started at 6.13.0. My confusion, yes, it looks like 6.12.43 was the last of the 6.12's... Development BOINC 6.12.43 change log: http://setiathome.berkeley.edu/forum_thread.php?id=64241 ...I was concerned that BOINC isn't pushing that release to newcomers on its OSX download page... BOINC: compute for science: http://boinc.berkeley.edu/download.php ...or recommending it on its client software page... Download BOINC client software: http://boinc.berkeley.edu/download_all.php ...I'm the jumpy sort when it comes to installing possibly unstable software (though you'd think that with some of the issues I've had 6.12.35 would have gotten me over that!...sorry...) though I feel good about .43. I'll try to muster up some courage and consider downloading it this weekend when I've got some time to play with it. :) |
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Being careful about development BOINC versions is a healthy attitude, I understand your reluctance. I have used two of the 7.0.xx versions due to POEM OpenCL requirements so am a bit more comfortable now about using development versions to overcome specific problems. The very unstable versions with severe problems are usually quickly removed from the list of downloadable versions. MB Atlanos is using 6.10.43 on a number of different projects on a Core2 Duo with Darwin 10.8.0. Also Cap is using 6.12.41 on a 24 core Xeon X5650 with Darwin 10.8.0. Just because it doesn't become the recommended version doesn't necessarily mean a development version has problems. It can be that the improvements/changes are only minor or only needed by a relatively small number of users, so the recommended version is not changed. If the recommended version is changed to suit a very small number of users then the number of problems caused by a large number of people updating to the new recommended BOINC version outweighs the benefit of the fixes for the few. This is possibly why the recommended version is not changed very often. The last few 6.12.xx development versions had more limited testing than usual as resources were moved to developing 6.13.xx versions. Many of the changes in 6.12.xx versions after 6.12.36 related to virtual machine issues related to Test for Theory. |
Send message Joined: 28 Sep 11 Posts: 60 Credit: 22,764,173 RAC: 0 ![]() ![]() |
Being careful about development BOINC versions is a healthy attitude, I understand your reluctance. I have used two of the 7.0.xx versions due to POEM OpenCL requirements so am a bit more comfortable now about using development versions to overcome specific problems. The very unstable versions with severe problems are usually quickly removed from the list of downloadable versions. Hi Kashi, I decided to get a jump on the weekend and went ahead and updated the iMac (it's the faster cruncher of my two machines) to 6.12.43 (after doing a backup of the BOINC User Data folder...just in case). Smooth as silk. I'll be letting it run MWAH flat-out with no interruptions for the next few days to see how it behaves. I'll be sure to post back any successes or failures...ha! Thanks for the encouragement on this! On a side note...how did you navigate FreeDC to find the view for MB Atlanos and Cap that you provided?, I can't seem to locate that stat view for my CPUs on their site! Thanks so much for all your time and efforts on this! :) |
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Hope 6.12.43 works OK for you. To find the details of your hosts. From project website: Your account>Computers on this account>click Free-DC(or BOINCstats) logo under first column, Computer ID. From Free-DC website: On your "User by CPID Stats page" click your score for a current project. Hosts will be shown on the page you go to, click ID of host you are interested in. Only works if hosts aren't hidden. Changes in host ID for the same computer means not all projects always show under the one host ID, especially projects you have not recently contributed to, if you are no longer attached. |
Send message Joined: 28 Sep 11 Posts: 60 Credit: 22,764,173 RAC: 0 ![]() ![]() |
Hope 6.12.43 works OK for you. Thanks for the well-wishes! Your instructions for finding that particular stats page was spot-on! Thanks! :) |
Send message Joined: 28 Sep 11 Posts: 60 Credit: 22,764,173 RAC: 0 ![]() ![]() |
...and, the laptop just performed its final 4-cpu crash so I decided to upgrade that to 6.12.43 as well...here's to smooth sailing!...(jinx?!)... :) |
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